Let KAYAK do the searching
Based on KAYAK hotel searches, the most popular destination is Ōtsu (45% of total searches to Shiga Prefecture). The next most popular destinations are Ōmihachiman (32%) and Takashima (18%). Searches for hotels in Hikone (5%) are also popular.
KAYAK users have found double rooms in Shiga Prefecture for as cheap as $97 (Nagahama) in the last 3 days. The average price is $351.